Mm01324608_m1

• Gene Symbol: Rtf1
• Gene Name: Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
• Gene Aliases: 2900005O08Rik, 6530416A09Rik, AI853581, AU043144, AW553985, Gtl7, cbp82
• Chromosome Location: Chr.2: 119675068 - 119735407 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rtf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_030112.2	NP_084388.2	1 - 2	211		61
GenBank mRNA	BC038032.1	-	1 - 2	184		61
	BC048535.1	-	1 - 2	195		61
	BC117848.1	-	1 - 2	63	40093717	61
	BC117849.1	-	1 - 2	63	40093724	61
	BY270385.1	-	1 - 2	205		61

More Information

Additional Information:

This assay is in the 5'UTR region of the BC117848.1, BC117849.1 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
endodermal cell fate commitment
blastocyst growth
transcription, DNA-templated
DNA-templated transcription, initiation
regulation of transcription, DNA-templated
Wnt signaling pathway
histone modification
stem cell population maintenance
positive regulation of transcription elongation from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter
positive regulation of histone H3-K4 methylation
histone H3-K4 trimethylation

Function(s)

DNA binding
single-stranded DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200013359.mm.1	NM_030112.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013359.mm.1	NM_030112.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013359.mm.1	TC0200001779.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200013356.mm.1	NM_030112.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013356.mm.1	NM_030112.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013356.mm.1	TC0200001779.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200013355.mm.1	NM_030112.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013355.mm.1	NM_030112.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013355.mm.1	TC0200001779.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	413747	-	-