Mm01324610_m1

• Gene Symbol: Rtf1
• Gene Name: Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
• Gene Aliases: 2900005O08Rik, 6530416A09Rik, AI853581, AU043144, AW553985, Gtl7, cbp82
• Chromosome Location: Chr.2: 119675068 - 119735407 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rtf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_030112.2	NP_084388.2	3 - 4	470		105
GenBank mRNA	AK019305.1	-	2 - 3	215		105
	BC022717.1	-	4 - 5	479		105
	BC038032.1	-	3 - 4	443		105
	BC048535.1	-	3 - 4	454		105
	BC117848.1	-	3 - 4	322	40093717	105
	BC117849.1	-	3 - 4	322	40093724	105

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200001779.mm.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
endodermal cell fate commitment
blastocyst growth
transcription, DNA-templated
DNA-templated transcription, initiation
regulation of transcription, DNA-templated
Wnt signaling pathway
histone modification
stem cell population maintenance
positive regulation of transcription elongation from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter
positive regulation of histone H3-K4 methylation
histone H3-K4 trimethylation

Function(s)

DNA binding
single-stranded DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200013363.mm.1	NM_030112.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013363.mm.1	NM_030112.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013363.mm.1	TC0200001779.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200013362.mm.1	NM_030112.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013362.mm.1	NM_030112.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013362.mm.1	TC0200001779.mm.1	MTA TC