Mm01337229_m1

• Gene Symbol: Pax6
• Gene Name: paired box 6
• Gene Aliases: 1500038E17Rik, AEY11, Dey, Gsfaey11, Pax-6, Sey
• Chromosome Location: Chr.2: 105667518 - 105697364 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pax6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001244200.1	NP_001231129.1	2 - 3	365		56
GenBank mRNA	CF725212.1	-	1 - 2	53		56
	X63963.1	-	1 - 2	30		56

More Information

Additional Information:

This assay is in the 5'UTR region of the NM_001244200.1, X63963.1 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
establishment of mitotic spindle orientation
blood vessel development
cell fate determination
neural crest cell migration
neuron migration
negative regulation of protein phosphorylation
positive regulation of neuroblast proliferation
epithelial cell development
lens development in camera-type eye
type B pancreatic cell differentiation
pancreatic A cell differentiation
pancreatic A cell development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
smoothened signaling pathway
multicellular organism development
axonogenesis
axon guidance
brain development
salivary gland morphogenesis
negative regulation of cell proliferation
regulation of asymmetric cell division
dorsal/ventral axis specification
anterior/posterior pattern specification
dorsal/ventral pattern formation
regulation of gene expression
positive regulation of gene expression
regulation of neuron projection development
pallium development
rhombomere morphogenesis
olfactory bulb development
oligodendrocyte cell fate specification
cerebral cortex regionalization
forebrain anterior/posterior pattern specification
forebrain dorsal/ventral pattern formation
commitment of neuronal cell to specific neuron type in forebrain
forebrain-midbrain boundary formation
regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification
regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment
telencephalon regionalization
pituitary gland development
interkinetic nuclear migration
signal transduction involved in regulation of gene expression
cell differentiation
keratinocyte differentiation
regulation of cell migration
positive regulation of epithelial cell differentiation
forebrain development
hindbrain development
lacrimal gland development
protein localization to organelle
eye photoreceptor cell development
glucose homeostasis
positive regulation of cell fate specification
camera-type eye development
cell fate commitment
regulation of neuron differentiation
negative regulation of neuron differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of timing of cell differentiation
embryonic camera-type eye morphogenesis
astrocyte differentiation
negative regulation of epithelial cell proliferation
regulation of neurogenesis
retina development in camera-type eye
iris morphogenesis
cornea development in camera-type eye
neural precursor cell proliferation
positive regulation of glucagon secretion
insulin metabolic process
negative regulation of neural precursor cell proliferation
positive regulation of neuron migration

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
AT DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
protein kinase binding
ubiquitin protein ligase binding
histone acetyltransferase binding
sequence-specific DNA binding
transcription regulatory region DNA binding
co-SMAD binding
R-SMAD binding
HMG box domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	630797	-	-