Mm01340736_m1 Best Coverage

• Gene Symbol: Ccdc22
• Gene Name: coiled-coil domain containing 22
• Gene Aliases: AI481216, DXImx40e, Ppp1r3f, Sfc22
• Chromosome Location: Chr.X: 7593809 - 7605420 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccdc22
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138603.3	NP_613069.3	1 - 2	174		68
GenBank mRNA	AF229637.1	-	1 - 2	115		68
	AK010536.1	-	1 - 2	92		68
	AK039573.1	-	1 - 2	147		68
	BC011195.1	-	1 - 2	79	4188459	68

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00003412.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccdc22

Gene Ontology Categories:

Process(es)

transport
cellular copper ion homeostasis
Golgi to plasma membrane transport
cytoplasmic sequestering of NF-kappaB
protein transport
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Function(s)

protein binding
cullin family protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00011222.mm.1	NM_138603.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011222.mm.1	NM_138603.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011222.mm.1	TC0X00003412.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00011223.mm.1	NM_138603.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011223.mm.1	NM_138603.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011223.mm.1	TC0X00003412.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00021160.mm.1	NM_138603.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00021160.mm.1	NM_138603.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00021160.mm.1	TC0X00003412.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	314050	-	-