Mm01345375_m1 Best Coverage

• Gene Symbol: Ncbp1
• Gene Name: nuclear cap binding protein subunit 1
• Gene Aliases: AU014645, AW538051, CBP80
• Chromosome Location: Chr.4: 46138511 - 46172403 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ncbp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033201.3	NP_001028373.2	7 - 8	1020		57
GenBank mRNA	AK133991.1	-	7 - 8	976		57
	AK134334.1	-	7 - 8	1011		57
	AK166458.1	-	7 - 8	802		57
	AK169557.1	-	7 - 8	1021		57
	BC033473.1	-	6 - 7	636		57
	BC034658.1	-	4 - 5	462		57
	BC055777.1	-	4 - 5	446		57
	BC138898.1	-	7 - 8	891	8861920	57

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000501.mm.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
7-methylguanosine mRNA capping
mRNA cleavage
mRNA processing
mRNA export from nucleus
regulation of translation
regulation of translational initiation
transport
RNA splicing
RNA metabolic process
gene silencing by RNA
positive regulation of mRNA 3'-end processing
mRNA cis splicing, via spliceosome
mRNA transport

Function(s)

RNA cap binding
RNA binding
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400003646.mm.1	NM_001033201.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400003646.mm.1	NM_001033201.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0400003646.mm.1	TC0400000501.mm.1	MTA TC