Mm01348426_m1 Best Coverage

• Gene Symbol: Shroom2
• Gene Name: shroom family member 2
• Gene Aliases: 4832440C16, Apxl, C630003H05Rik, Shrm2
• Chromosome Location: Chr.X: 152609509 - 152770251 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shroom2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001290684.1	NP_001277613.1	7 - 8	3780		63
	NM_001290685.1	NP_001277614.1	3 - 4	1105		63
	NM_001290686.1	NP_001277615.1	3 - 4	912		63
	NM_001290687.1	NP_001277616.1	3 - 4	1094		63
	NM_172441.3	NP_766029.2	7 - 8	3798		63
GenBank mRNA	AK029338.1	-	3 - 4	786		63
	AK032256.1	-	3 - 4	787		63
	AK049850.1	-	3 - 4	844		63
	BC092373.1	-	3 - 4	1100		63
	EF071946.1	-	7 - 8	3798		63

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00003197.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shroom2

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

cell morphogenesis
lens morphogenesis in camera-type eye
multicellular organism development
brain development
eye pigment granule organization
cell migration
negative regulation of actin filament depolymerization
establishment of melanosome localization
melanosome organization
camera-type eye development
cellular pigment accumulation
ear development
apical protein localization
cell-cell junction maintenance
camera-type eye morphogenesis
actin filament bundle assembly

Function(s)

actin binding
protein binding
beta-catenin binding
protein domain specific binding
actin filament binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00020105.mm.1	NM_172441.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00020105.mm.1	TC0X00003197.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00020102.mm.1	NM_172441.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00020102.mm.1	TC0X00003197.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	415716	-	-