Mm01348780_m1

• Gene Symbol: Clcn3
• Gene Name: chloride channel 3
• Gene Aliases: Clc3
• Chromosome Location: Chr.8: 60910389 - 60983311 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clcn3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_007711.3	NP_031737.1	9 - 10	2125		71
	NM_173873.1	NP_776298.1	10 - 11	2301		71
	NM_173874.1	NP_776299.1	10 - 11	2301		71
	NM_173876.3	NP_776301.1	9 - 10	1846		71
GenBank mRNA	AF029347.1	-	9 - 10	1749		71
	AK141136.1	-	10 - 11	2239		71
	AK149276.1	-	10 - 11	1840		71
	AK150688.1	-	10 - 11	2230		71
	AK159698.1	-	10 - 11	2275		71
	AK161327.1	-	10 - 11	2229		71
	AK162639.1	-	10 - 11	2242		71
	AK169297.1	-	10 - 11	2222		71
	BC057133.1	-	9 - 10	1779	6833732	71
	BC057855.1	-	9 - 10	1941		71
	X78874.1	-	9 - 10	1950		71

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800002290.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clcn3

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

transport
ion transport
chloride transport
phagocytosis, engulfment
adult locomotory behavior
regulation of ion transmembrane transport
synaptic transmission, glutamatergic
regulation of anion transport
photoreceptor cell maintenance
negative regulation of cell volume
synaptic transmission, GABAergic
transmembrane transport
neuron cellular homeostasis
synaptic vesicle lumen acidification
chloride transmembrane transport
positive regulation of reactive oxygen species biosynthetic process
regulation of anion transmembrane transport

Function(s)

nucleotide binding
ion channel activity
voltage-gated ion channel activity
voltage-gated chloride channel activity
chloride channel activity
ATP binding
antiporter activity
PDZ domain binding
protein heterodimerization activity
volume-sensitive chloride channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_007711.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_007711.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173873.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173873.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173876.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	NM_173876.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017282.mm.1	TC0800002290.mm.1	MTA TC