Mm01717143_m1 Best Coverage

• Gene Symbol: Hotair
• Gene Name: HOX transcript antisense RNA (non-protein coding)
• Gene Aliases: Gm16258, OTTMUSG00000032781
• Chromosome Location: Chr.15: 102944062 - 102947946 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hotair
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_047528.1		1 - 2	444		86
GenBank mRNA	AK035706.1	-	1 - 2	228		86
	BB628325.1	-	1 - 2	225		86

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002304.mm.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

positive regulation of chromatin silencing
regulation of histone H3-K4 methylation
regulation of histone H3-K27 methylation

Function(s)

protein binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500019083.mm.1	NR_047528.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500019083.mm.1	TC1500002304.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500019084.mm.1	NR_047528.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500019084.mm.1	TC1500002304.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500019085.mm.1	NR_047528.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500019085.mm.1	TC1500002304.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	393657	-	-