Mm02600883_m1 Best Coverage

• Gene Symbol: Foxr1
• Gene Name: forkhead box R1
• Gene Aliases: Foxn5, Gm1115
• Chromosome Location: Chr.9: 44434234 - 44440868 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Foxr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033469.2	NP_001028641.1	1 - 2	116		74
GenBank mRNA	AK139562.1	-	1 - 2	116		74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900002166.mm.1

• Set Membership: Amplicon length between 71 and 85, Recommended Assay, Mus musculus, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
anatomical structure morphogenesis
cell differentiation

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900018010.mm.1	NM_001033469.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018010.mm.1	NM_001033469.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018010.mm.1	TC0900002166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900018008.mm.1	NM_001033469.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018008.mm.1	NM_001033469.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018008.mm.1	TC0900002166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900018009.mm.1	NM_001033469.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018009.mm.1	NM_001033469.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900018009.mm.1	TC0900002166.mm.1	MTA TC