Mm04242734_g1 Best Coverage

• Gene Symbol: Gm8909
• Gene Name: predicted gene 8909
• Gene Aliases: EG667977, H2-Tw5l, H2-gs17
• Chromosome Location: Chr.17: 36141749 - 36168592 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gm8909
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001081032.2	NP_001074501.2	1 - 2	93		79
GenBank mRNA	AB359231.2	-	1 - 2	93		79

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700002004.mm.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Mus musculus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Process(es)

antigen processing and presentation of peptide antigen via MHC class I

Function(s)

receptor binding
peptide antigen binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P1956160	AB359231.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P1956160	NM_001081032.2	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	891589	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	3877	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P1956160	AB359231.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P1956160	NM_001081032.2	mouse_transcriptome
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162858	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162851	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162786	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162773	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162826	-	-
Agilent Mouse Whole Genome ChIP-on-Chip	A_68_P31162819	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13107013	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13515919	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13253474	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162826	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162814	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162867	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162854	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13253477	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13204095	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162787	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162851	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162861	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13163846	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162831	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13253483	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162844	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13530626	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P31162774	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13128854	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13530622	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13492190	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10450717	-	-
Affymetrix Mouse Gene 1.0 ST Array	10450720	-	-
Affymetrix Mouse Gene 1.0 ST Array	10450722	-	-
Affymetrix Mouse Gene 1.0 ST Array	10450721	-	-
Affymetrix Mouse Gene 1.0 ST Array	10450719	-	-
Affymetrix Mouse Gene 1.0 ST Array	10450718	-	-
Affymetrix Mouse Gene 1.1 ST Array	10450704	-	-
Affymetrix Mouse Clariom S Array	PSR1700019226.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019226.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019226.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019234.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019234.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019234.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019233.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019233.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019233.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019238.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019238.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019238.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019240.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019240.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019240.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019231.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019231.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019231.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019235.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019235.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019235.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019228.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019228.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019228.mm.1	TC1700002004.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700019229.mm.1	NM_001081032.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019229.mm.1	NM_001081032.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700019229.mm.1	TC1700002004.mm.1	MTA TC
Mouse Expression Set 430	1447260_at	-	-
Mouse Expression Set 430	1447260_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	675921	-	-

Array Name	Probe IDs	Targets	Target Type
MouseRef-8 v2 Expression BeadChip	ILMN_2835683	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_2835683	-	-