Mm04278139_s1

• Gene Symbol: Hmga2-ps1
• Gene Name: high mobility group AT-hook 2, pseudogene 1
• Gene Aliases: EG666235, Gm7996, Hmgic-ps1, [y]i-c
• Chromosome Location: Chr.1: 176834624 - 176836133 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hmga2-ps1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037996.1		1	1126		64
GenBank mRNA	AK033703.1	-	1	1127		64
	BC064076.1	-	1	1095		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CO806521.1	-	1			Chr. 1 - 176834623 - 176835320 [+] on Build GRCm38	64
GenBankmRNA	DV660489.1	-	1	92		Chr. 1 - 176834623 - 176835084 [-] on Build GRCm38	64
GenBankmRNA	AV377334.2	-	1	334		Chr. 1 - 176834628 - 176835329 [-] on Build GRCm38	64
GenBankmRNA	CF104857.1	-	1	352		Chr. 1 - 176834786 - 176835360 [-] on Build GRCm38	64
GenBankmRNA	BX517959.1	-	1	58		Chr. 1 - 176834623 - 176835064 [-] on Build GRCm38	64
GenBankmRNA	AA980725.1	-	1	57		Chr. 1 - 176834628 - 176835064 [-] on Build GRCm38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	centrosomal protein 170	Cep170	4933426L22Rik, A330004A13Rik, AI195353	-20.5kb	Sense	Chr. 1 - 176733653 - 176814173 on NCBI Build GRCm38
Downstream	predicted gene 15423	Gm15423	OTTMUSG00000021520	72.6kb	Sense	Chr. 1 - 176908759 - 176941002 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, 1700, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2320283	AK033703.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2320283	AV377334.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2320283	AA980725.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2320283	BC064076.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P449580	AK033703.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P125438	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1440559_PM_at	-	-
Mouse Genome 430 2.0 Array	1440559_PM_at	-	-
Mouse Genome 430 2.0 Array	1440559_at	-	-
Affymetrix Mouse Clariom S Array	PSR0100029764.mm.1	NR_037996.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100029764.mm.1	TC0100003625.mm.1	MTA TC
Mouse Expression Set 430	1440559_at	-	-
Mouse Expression Set 430	1440559_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440559_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440559_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	853873	-	-

Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	106940102	-	-
Illumina mouse-6 v1.0 expression beadchip	104150390	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_2521893	-	-
mouse-6 v1.1 (Illumina)	scl0015365.1_6-S	-	-
Illumina Sentrix mouse-6.v1 bead array	104150390	-	-
Illumina Sentrix Mouse-6 Expression BeadChip (2)	104150390	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_2521893	-	-