Mm04278225_g1

• Gene Symbol: Gm3143
• Gene Name: predicted gene 3143
• Gene Aliases: -
• Chromosome Location: Chr.3: 34699640 - 34716662 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gm3143
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038348.1		3 - 4	369		64
GenBank mRNA	DV654203.1	-	3 - 4	368		64
	DV662335.1	-	3 - 4	369		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA823902.1	-	1 - 2	94		Chr. 3 - 34709625 - 34710259 [-] on Build GRCm38	64
GenBankmRNA	BX514451.1	-	1 - 2	95		Chr. 3 - 34709625 - 34710260 [-] on Build GRCm38	64
GenBankmRNA	AU021495.1	-	1 - 2			Chr. 3 - 34709623 - 34710258 [+] on Build GRCm38	64
GenBankmRNA	CO800009.1	-	2 - 3	241		Chr. 3 - 34709623 - 34714003 [-] on Build GRCm38	64
GenBankmRNA	AA549214.1	-	1 - 2	86		Chr. 3 - 34709651 - 34710252 [-] on Build GRCm38	64
GenBankmRNA	BG070805.2	-	1 - 2			Chr. 3 - 34709732 - 34716633 [+] on Build GRCm38	64
GenBankmRNA	CJ200314.1	-	1 - 2	63		Chr. 3 - 34709623 - 34710228 [-] on Build GRCm38	64
GenBankmRNA	BG083808.2	-	3 - 4	340		Chr. 3 - 34709716 - 34716633 [-] on Build GRCm38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SOX2 overlapping transcript (non-protein coding)	Sox2ot	B230215L15Rik	-31.6kb	Anti-sense	Chr. 3 - 34560381 - 34677993 on NCBI Build GRCm38
Downstream	predicted gene, 38509	Gm38509	Peril	61.7kb	Anti-sense	Chr. 3 - 34772075 - 34782346 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300001834.mm.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300014154.mm.1	NR_038348.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300014154.mm.1	NR_038348.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300014154.mm.1	TC0300001834.mm.1	MTA TC