Mm04409918_s1

• Gene Symbol: Hnrnpk
• Gene Name: heterogeneous nuclear ribonucleoprotein K
• Gene Aliases: Hnrpk, KBBP, NOVA
• Chromosome Location: Chr.13: 58391132 - 58403343 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hnrnpk
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001301340.1	NP_001288269.1	16	2078		173
	NM_001301341.1	NP_001288270.1	18	2205		173
	NM_001301343.1	NP_001288272.1	16	2064		173
	NM_001301344.1	NP_001288273.1	15	2006		173
	NM_001301345.1	NP_001288274.1	15	1946		173
	NM_025279.3	NP_079555.1	16	2018		173
GenBank mRNA	AK088462.1	-	15	1932		173
	AK128891.1	-	16	2015		174
	AK135519.1	-	16	1991		172
	AK150848.1	-	16	2058		173
	AK151689.1	-	15	1959		173
	AK152927.1	-	15	1960		173
	AK160887.1	-	16	2019		173
	AK166656.1	-	16	2082		172
	AK167600.1	-	16	2008		172
	AK168918.1	-	12	1919		173
	BC089328.1	-	16	2002	6402614	173

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1300002099.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Apoptosis, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hnrnpk

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
ovarian follicle development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
mRNA processing
RNA splicing
positive regulation of neuron projection development
regulation of low-density lipoprotein particle clearance
cellular response to insulin stimulus
positive regulation of RNA splicing
negative regulation of apoptotic process
positive regulation of low-density lipoprotein particle receptor biosynthetic process
positive regulation of transcription from RNA polymerase II promoter
negative regulation of mRNA splicing, via spliceosome
positive regulation of receptor-mediated endocytosis
positive regulation of synaptic transmission
positive regulation of dendritic spine development
cellular response to organic cyclic compound
regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter
positive regulation of synapse maturation
positive regulation of long-term synaptic potentiation
regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
positive regulation of dendrite extension
positive regulation of protein localization to cell surface
negative regulation of branching morphogenesis of a nerve

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
core promoter proximal region DNA binding
nucleic acid binding
DNA binding
single-stranded DNA binding
RNA binding
mRNA 3'-UTR binding
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300013364.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013363.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013363.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013367.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013367.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013372.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013372.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013373.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013373.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013358.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013361.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013361.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013404.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013366.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013366.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013362.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013362.mm.1	TC1300002099.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300013365.mm.1	NM_025279.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1300013365.mm.1	TC1300002099.mm.1	MTA TC