Mm04412126_g1

• Gene Symbol: Trim46
• Gene Name: tripartite motif-containing 46
• Gene Aliases: TRIFIC
• Chromosome Location: Chr.3: 89234169 - 89246154 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trim46
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121683.1		7 - 8	1532		112
GenBank mRNA	BC065049.1	-	7 - 8	1445	6418851	112

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BQ572116.1	-	3 - 4	489		Chr. 3 - 89237679 - 89242250 [-] on Build GRCm38	112
GenBankmRNA	CA534558.1	-	2 - 3	194		Chr. 3 - 89237695 - 89239345 [-] on Build GRCm38	112
GenBankmRNA	CA534567.1	-	2 - 3	194		Chr. 3 - 89235250 - 89239345 [-] on Build GRCm38	112

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	mucin 1, transmembrane	Muc1	CD227, EMA, Muc-1	-5.3kb	Anti-sense	Chr. 3 - 89229056 - 89233381 on NCBI Build GRCm38
Downstream	keratinocyte associated protein 2	Krtcap2	0610010I12Rik, Kcp2	7.3kb	Anti-sense	Chr. 3 - 89246300 - 89249723 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002342.mm.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

zinc ion binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300017928.mm.1	TC0300002342.mm.1	MTA TC