Assay Details
Gene Symbol: Tlr9 | ||||||
---|---|---|---|---|---|---|
Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
RefSeq | NM_031178.2 | NP_112455.2 | 1 - 2 | 109 | 62 | |
GenBank mRNA | AB045181.1 | - | 1 - 2 | 109 | 62 | |
AF314224.1 | - | 1 - 2 | 88 | 62 | ||
AF348140.1 | - | 1 - 2 | 42 | 62 |

More Information
Additional Information:
This assay is in the 5'UTR region of the AB045181.1, AF314224.1, AF348140.1, NM_031178.2 transcripts.
Set Membership: |
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Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
microglial cell activation
regulation of protein phosphorylation
toll-like receptor signaling pathway
response to molecule of bacterial origin
immune system process
regulation of dendritic cell cytokine production
MyD88-dependent toll-like receptor signaling pathway
inflammatory response
immune response
signal transduction
I-kappaB phosphorylation
response to virus
positive regulation of autophagy
positive regulation of gene expression
maintenance of gastrointestinal epithelium
negative regulation of NF-kappaB transcription factor activity
tumor necrosis factor production
negative regulation of interleukin-6 production
negative regulation of interleukin-8 production
positive regulation of chemokine production
positive regulation of granulocyte macrophage colony-stimulating factor production
positive regulation of interferon-beta production
positive regulation of interleukin-10 production
positive regulation of interleukin-12 production
positive regulation of interleukin-18 production
positive regulation of interleukin-6 production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
negative regulation of toll-like receptor signaling pathway
positive regulation of toll-like receptor signaling pathway
toll-like receptor 9 signaling pathway
positive regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of JUN kinase activity
positive regulation of interferon-gamma biosynthetic process
innate immune response
positive regulation of interferon-alpha biosynthetic process
positive regulation of interferon-beta biosynthetic process
positive regulation of transcription from RNA polymerase II promoter
regulation of cytokine secretion
regulation of inflammatory response
positive regulation of inflammatory response
defense response to Gram-negative bacterium
regulation of B cell activation
positive regulation of NF-kappaB transcription factor activity
defense response to virus
positive regulation of nitric-oxide synthase biosynthetic process
negative regulation of calcium-transporting ATPase activity
transmembrane signaling receptor activity
interleukin-1 receptor binding
protein binding
siRNA binding
unmethylated CpG binding
microglial cell activation
regulation of protein phosphorylation
toll-like receptor signaling pathway
response to molecule of bacterial origin
immune system process
regulation of dendritic cell cytokine production
MyD88-dependent toll-like receptor signaling pathway
inflammatory response
immune response
signal transduction
I-kappaB phosphorylation
response to virus
positive regulation of autophagy
positive regulation of gene expression
maintenance of gastrointestinal epithelium
negative regulation of NF-kappaB transcription factor activity
tumor necrosis factor production
negative regulation of interleukin-6 production
negative regulation of interleukin-8 production
positive regulation of chemokine production
positive regulation of granulocyte macrophage colony-stimulating factor production
positive regulation of interferon-beta production
positive regulation of interleukin-10 production
positive regulation of interleukin-12 production
positive regulation of interleukin-18 production
positive regulation of interleukin-6 production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
negative regulation of toll-like receptor signaling pathway
positive regulation of toll-like receptor signaling pathway
toll-like receptor 9 signaling pathway
positive regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of JUN kinase activity
positive regulation of interferon-gamma biosynthetic process
innate immune response
positive regulation of interferon-alpha biosynthetic process
positive regulation of interferon-beta biosynthetic process
positive regulation of transcription from RNA polymerase II promoter
regulation of cytokine secretion
regulation of inflammatory response
positive regulation of inflammatory response
defense response to Gram-negative bacterium
regulation of B cell activation
positive regulation of NF-kappaB transcription factor activity
defense response to virus
positive regulation of nitric-oxide synthase biosynthetic process
negative regulation of calcium-transporting ATPase activity
transmembrane signaling receptor activity
interleukin-1 receptor binding
protein binding
siRNA binding
unmethylated CpG binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
Array Name | Probe IDs | Targets | Target Type |
---|---|---|---|
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801964 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801967 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801965 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801966 | - | - |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 87241 | - | - |
Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 334568 | AK016413.1 | genbank_mrna_mouse |
Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P178290 | - | - |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | AF314224.1 | mouse_transcriptome |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | AB045181.1 | mouse_transcriptome |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | AF314224.1 | mouse_transcriptome |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801942 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801929 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801952 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801957 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801923 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801941 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801958 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801934 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801930 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801922 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801946 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801955 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801932 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801959 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801920 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801961 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801943 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801935 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801940 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801925 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801963 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801927 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801917 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801936 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801938 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801953 | - | - |
Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P26801949 | - | - |
Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P02022459 | - | - |
Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P178290 | - | - |
Whole Mouse Genome G4122A | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Whole Mouse Genome G4122A | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Whole Mouse Genome G4122A | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Whole Mouse Genome G4122A | A_51_P432563 | AF314224.1 | mouse_transcriptome |
Whole Mouse Genome G4122A | A_51_P432563 | NM_031178.2 | mouse_transcriptome |
Whole Mouse Genome G4122A | A_51_P432563 | AB045181.1 | mouse_transcriptome |
Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P105230 | - | - |
Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P178290 | - | - |
Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07786629 | - | - |
Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07786648 | - | - |
Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07786657 | - | - |
Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P07786622 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801967 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801965 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801966 | - | - |
Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P26801964 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801938 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801936 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801941 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801928 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801943 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801980 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801973 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801916 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801908 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801934 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801940 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801957 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26802033 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801965 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801914 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801971 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801958 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801946 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801978 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801976 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801961 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801969 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801955 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26802030 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801953 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26802028 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801929 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801932 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801949 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801966 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26802029 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801917 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801963 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801915 | - | - |
Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P26801952 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801953 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801955 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801922 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07499033 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786654 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801932 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07580441 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801908 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801941 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801963 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801915 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07757528 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801943 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801966 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07648210 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801920 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786619 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786644 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786675 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801934 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801976 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P08025180 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801942 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801927 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801916 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801958 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07601126 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801914 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07542236 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801936 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786634 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801921 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801978 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801923 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801928 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801940 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801930 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07499034 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801917 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801961 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P07786660 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801980 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801957 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801951 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P08034150 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801965 | - | - |
Agilent Six_ChIP_02_of_03_v2 | A_68_P26801912 | - | - |
Array Name | Probe IDs | Targets | Target Type |
---|---|---|---|
Affymetrix Mouse Gene 1.0 ST Array | 10588480 | - | - |
Affymetrix Mouse Gene 1.0 ST Array | 10588481 | - | - |
Affymetrix HT MG-430 PM Array Plate | 1422083_PM_at | - | - |
Affymetrix Mouse Gene 1.1 ST Array | 10588479 | - | - |
Mouse Genome 430 2.0 Array | 1422083_PM_at | - | - |
Mouse Genome 430 2.0 Array | 1422083_at | - | - |
Affymetrix GeneChip Mouse Genome 430 2.0 Array | 81897_at | - | - |
Affymetrix GeneChip Mouse Genome 430 2.0 Array | 81897_PM_at | - | - |
Affymetrix Mouse Clariom S Array | PSR0900010444.mm.1 | NM_031178.2.1 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010444.mm.1 | NM_031178.2 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010444.mm.1 | TC0900001339.mm.1 | MTA TC |
Affymetrix Mouse Clariom S Array | PSR0900010445.mm.1 | NM_031178.2.1 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010445.mm.1 | NM_031178.2 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010445.mm.1 | TC0900001339.mm.1 | MTA TC |
Affymetrix Mouse Clariom S Array | PSR0900010442.mm.1 | NM_031178.2.1 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010442.mm.1 | NM_031178.2 | Refseq |
Affymetrix Mouse Clariom S Array | PSR0900010442.mm.1 | TC0900001339.mm.1 | MTA TC |
Mouse Expression Set 430 | 1422083_PM_at | - | - |
Mouse Expression Set 430 | 1422083_at | - | - |
Mouse Genome 430A 2.0 Array | 1422083_at | - | - |
Mouse Genome 430A 2.0 Array | 1422083_PM_at | - | - |
Affymetrix HT Mouse Genome 430A Array | 1422083_at | - | - |
Affymetrix HT Mouse Genome 430A Array | 1422083_PM_at | - | - |
Array Name | Probe IDs | Targets | Target Type |
---|---|---|---|
MouseWG-6 v2 Expression BeadChip | 670706 | - | - |
Illumina mouse-6 v1.0 expression beadchip | 670093 | - | - |
Illumina mouse-6 v1.0 expression beadchip | 670706 | - | - |
Illumina mouseRef-8 v1.0 expression beadchip | 0000670093 | - | - |
Illumina mouseRef-8 v1.0 expression beadchip | 0000670706 | - | - |
Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2454579 | - | - |
Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2449109 | - | - |
Illumina mouse-6 v1.1 expression beadchip | ILMN_2449109 | - | - |
Illumina mouse-6 v1.1 expression beadchip | ILMN_2454579 | - | - |
mouse-6 v1.1 (Illumina) | scl0003574.1_1-S | - | - |
mouse-6 v1.1 (Illumina) | scl36515.2.1_2-S | - | - |
Illumina Sentrix mouse-6.v1 bead array | 670093 | - | - |
Illumina Sentrix mouse-6.v1 bead array | 670706 | - | - |
Illumina Sentrix MouseRef-8 Expression BeadChip | scl0003574.1_1-S | - | - |
Illumina Sentrix MouseRef-8 Expression BeadChip | scl36515.2.1_2-S | - | - |
Illumina Sentrix Mouse-6 Expression BeadChip (2) | 670706 | - | - |
Illumina Sentrix Mouse-6 Expression BeadChip (2) | 670093 | - | - |
Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2454579 | - | - |
Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2849322 | - | - |
