Rn00565920_m1 Best Coverage

• Gene Symbol: Myf6
• Gene Name: myogenic factor 6
• Gene Aliases: MRF4AA
• Chromosome Location: Chr.7: 49739646 - 49741540 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Myf6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013172.1	NP_037304.1	1 - 2	615		59
GenBank mRNA	M27151.1	-	1 - 2	565		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002648.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Myf6

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

somitogenesis
transcription from RNA polymerase II promoter
skeletal muscle tissue development
skeletal muscle cell differentiation
skeletal muscle tissue regeneration
positive regulation of myoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of skeletal muscle fiber development
muscle tissue morphogenesis
positive regulation of myoblast fusion

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
molecular_function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1001782	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	607382	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1001782	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1001782	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1001782	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1001782	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700918360	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76068	-	-
Agilent Rat cDNA Microarray (G4105A)	700918360	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10902138	-	-
Affymetrix Rat Gene 1.0 ST Array	10902137	-	-
Affymetrix Rat Gene 1.0 ST Array	10902136	-	-
Affymetrix Rat Gene 1.0 ST Array	10902139	-	-
Affymetrix Rat Gene 1.1 ST Array	10902135	-	-
Rat Genome 230 2.0 Array	1387181_at	-	-
Rat Genome 230 2.0 Array	1387181_PM_at	-	-
Affymetrix HT Rat Focus Array	1387181_at	-	-
Affymetrix HT Rat Focus Array	1387181_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700020658.rn.1	TC0700002648.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700020659.rn.1	TC0700002648.rn.1	RTA TC
Rat Expression Set 230	1387181_at	-	-
Rat Expression Set 230	1387181_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10902135	-	-
Rat Genome U34 Set	M27151_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22371433	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372885	-	-
RatRef-12 Expression BeadChip	ILMN_49890	-	-