Rn00578225_m1 Best Coverage

• Gene Symbol: Cxcl1
• Gene Name: chemokine (C-X-C motif) ligand 1
• Gene Aliases: CINC-1, Gro1
• Chromosome Location: Chr.14: 18743678 - 18745457 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxcl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_030845.1	NP_110472.1	3 - 4	323		102
GenBank mRNA	D11444.1	-	3 - 4	308		102
	M86536.1	-	3 - 4	323		102

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400001504.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcl1

Panther Classification:

Molecular Function -

chemokine

Gene Ontology Categories:

Process(es)

response to amphetamine
response to molecule of bacterial origin
acute inflammatory response
positive regulation of leukocyte chemotaxis
immune response
G-protein coupled receptor signaling pathway
positive regulation of cytosolic calcium ion concentration
response to heat
response to gamma radiation
positive regulation of sodium ion transport
neutrophil chemotaxis
response to estradiol
response to lipopolysaccharide
positive regulation of superoxide anion generation
regulation of cell proliferation
positive regulation of potassium ion transport
response to glucocorticoid
cell chemotaxis
chemokine-mediated signaling pathway
positive regulation of neutrophil mediated killing of fungus
positive regulation of hematopoietic stem cell proliferation

Function(s)

chemokine activity
growth factor activity
CXCR chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P473398	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	341726	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P473398	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P473398	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P473398	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P473398	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94401	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10775903	-	-
Affymetrix Rat Gene 1.0 ST Array	10775902	-	-
Affymetrix Rat Gene 1.0 ST Array	10775901	-	-
Affymetrix Rat Gene 1.0 ST Array	10775904	-	-
Affymetrix Rat Gene 1.1 ST Array	10775900	-	-
Rat Genome 230 2.0 Array	1387316_at	-	-
Rat Genome 230 2.0 Array	1387316_PM_at	-	-
Affymetrix HT Rat Focus Array	1387316_at	-	-
Affymetrix HT Rat Focus Array	1387316_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400011052.rn.1	TC1400001504.rn.1	RTA TC
Rat Expression Set 230	1387316_at	-	-
Rat Expression Set 230	1387316_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10775900	-	-
Rat Genome U34 Set	D11445exon#1-4_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22317053	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355237	-	-
RatRef-12 Expression BeadChip	ILMN_52651	-	-