Rn00586627_m1 Best Coverage

• Gene Symbol: Rax
• Gene Name: retina and anterior neural fold homeobox
• Gene Aliases: Rx
• Chromosome Location: Chr.18: 61638352 - 61642056 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rax
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053678.1	NP_446130.1	2 - 3	549		83
GenBank mRNA	AF135839.1	-	2 - 3	549		83

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800001587.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rax

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
multicellular organism development
pattern specification process
brain development
hypothalamus development
camera-type eye development
positive regulation of transcription from RNA polymerase II promoter
limb development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P039071	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P166118	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	407098	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	126978	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	142596	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039071	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P166118	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039071	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P166118	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P039071	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P166118	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P198829	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	21254	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10802370	-	-
Affymetrix Rat Gene 1.0 ST Array	10802368	-	-
Affymetrix Rat Gene 1.0 ST Array	10802369	-	-
Affymetrix Rat Gene 1.1 ST Array	10802367	-	-
Rat Genome 230 2.0 Array	1398284_at	-	-
Rat Genome 230 2.0 Array	1398503_PM_at	-	-
Rat Genome 230 2.0 Array	1398503_at	-	-
Rat Genome 230 2.0 Array	1398284_PM_at	-	-
Affymetrix HT Rat Focus Array	1398284_at	-	-
Affymetrix HT Rat Focus Array	1398503_at	-	-
Affymetrix HT Rat Focus Array	1398503_PM_at	-	-
Affymetrix HT Rat Focus Array	1398284_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1800011252.rn.1	TC1800001587.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800011253.rn.1	TC1800001587.rn.1	RTA TC
Rat Expression Set 230	1398284_PM_at	-	-
Rat Expression Set 230	1398284_at	-	-
Rat Expression Set 230	1398503_PM_at	-	-
Rat Expression Set 230	1398503_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10802367	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22128835	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1348786	-	-
RatRef-12 Expression BeadChip	ILMN_55149	-	-