Rn00589173_m1 Best Coverage

• Gene Symbol: Nr0b2
• Gene Name: nuclear receptor subfamily 0, group B, member 2
• Gene Aliases: Shp
• Chromosome Location: Chr.5: 151776004 - 151779319 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr0b2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_057133.1	NP_476474.1	1 - 2	578		62
GenBank mRNA	BC088117.1	-	1 - 2	565	7324177	62
	D86580.1	-	1 - 2	578		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001625.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Nuclear Receptor, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr0b2

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor, DNA-binding transcription factor, zinc finger transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
response to glucose
positive regulation of gene expression
negative regulation of gene expression
organ regeneration
positive regulation of insulin secretion
steroid hormone mediated signaling pathway
negative regulation of sequence-specific DNA binding transcription factor activity
negative regulation of transcription, DNA-templated

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
transcription corepressor activity
transcription factor binding
protein domain specific binding
protein complex binding
protein homodimerization activity
retinoic acid receptor binding
peroxisome proliferator activated receptor binding
retinoid X receptor binding
thyroid hormone receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P13041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	397707	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	959561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334804	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	151741	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13041	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13041	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P13041	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13041	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700480121	-	-
Agilent Rat cDNA Microarray (G4105A)	700480121	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10880268	-	-
Affymetrix Rat Gene 1.0 ST Array	10880269	-	-
Affymetrix Rat Gene 1.1 ST Array	10880267	-	-
Rat Genome 230 2.0 Array	1368376_PM_at	-	-
Rat Genome 230 2.0 Array	1368376_at	-	-
Affymetrix HT Rat Focus Array	1368376_at	-	-
Affymetrix HT Rat Focus Array	1368376_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500011760.rn.1	TC0500001625.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500011759.rn.1	TC0500001625.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500011758.rn.1	TC0500001625.rn.1	RTA TC
Rat Expression Set 230	1368376_PM_at	-	-
Rat Expression Set 230	1368376_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10880267	-	-
Rat Genome U34 Set	D86580_at	-	-
Rat Genome U34 Set	D86745cds_s_at	-	-
Rat Genome U34 Set	D86745exon_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21648864	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355189	-	-
RatRef-12 Expression BeadChip	ILMN_47892	-	-