Rn00596257_m1 Best Coverage

• Gene Symbol: Tor1a
• Gene Name: torsin family 1, member A
• Gene Aliases: Dyt1
• Chromosome Location: Chr.3: 9800322 - 9807318 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tor1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_153303.2	NP_695215.2	4 - 5	789		73
GenBank mRNA	AY054303.1	-	4 - 5	771		73
	BC078714.1	-	4 - 5	789	7134604	73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002840.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tor1a

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

protein deneddylation
response to oxidative stress
organelle organization
nuclear envelope organization
cell adhesion
neuron projection development
protein localization to nucleus
wound healing, spreading of cells
intermediate filament cytoskeleton organization
synaptic vesicle transport
chaperone mediated protein folding requiring cofactor
protein homooligomerization
regulation of dopamine uptake involved in synaptic transmission
chaperone-mediated protein folding
ER-associated misfolded protein catabolic process
nuclear membrane organization
chaperone-mediated protein transport
positive regulation of synaptic vesicle endocytosis
regulation of protein localization to cell surface

Function(s)

protein binding
ATP binding
cytoskeletal protein binding
ATPase activity
kinesin binding
misfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P304043	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	670189	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877668	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	235529	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	701382	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	678963	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	251600	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	180333	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P304043	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P304043	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P304043	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P304043	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10844234	-	-
Affymetrix Rat Gene 1.0 ST Array	10844233	-	-
Affymetrix Rat Gene 1.0 ST Array	10844232	-	-
Affymetrix Rat Gene 1.0 ST Array	10844230	-	-
Affymetrix Rat Gene 1.0 ST Array	10844231	-	-
Affymetrix Rat Gene 1.1 ST Array	10844229	-	-
Rat Genome 230 2.0 Array	1375357_at	-	-
Rat Genome 230 2.0 Array	1375357_PM_at	-	-
Affymetrix HT Rat Focus Array	1375357_at	-	-
Affymetrix HT Rat Focus Array	1375357_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300021706.rn.1	TC0300002840.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300021705.rn.1	TC0300002840.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300021704.rn.1	TC0300002840.rn.1	RTA TC
Rat Expression Set 230	1375357_PM_at	-	-
Rat Expression Set 230	1375357_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10844229	-	-
Rat Genome U34 Set	rc_AI072675_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21403300	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369915	-	-
RatRef-12 Expression BeadChip	ILMN_65733	-	-