Rn00596672_m1 Best Coverage

• Gene Symbol: Sostdc1
• Gene Name: sclerostin domain containing 1
• Gene Aliases: Usag1
• Chromosome Location: Chr.6: 55812820 - 55816994 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sostdc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_153737.1	NP_714959.1	1 - 2	279		81
GenBank mRNA	AF411056.1	-	1 - 2	279		81
	BC081710.1	-	1 - 2	253	7191839	81
	FQ213516.1	-	1 - 2	269		81

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600000628.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sostdc1

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Process(es)

pattern specification process
embryo implantation
negative regulation of cell fate commitment
Wnt signaling pathway
negative regulation of BMP signaling pathway
hair follicle morphogenesis
odontogenesis of dentin-containing tooth
mammary gland bud morphogenesis
negative regulation of canonical Wnt signaling pathway

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P575104	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	900608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	159664	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	102106	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	124838	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P575104	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P575104	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P575104	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P575104	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	38322	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10884277	-	-
Affymetrix Rat Gene 1.0 ST Array	10884276	-	-
Affymetrix Rat Gene 1.0 ST Array	10884275	-	-
Affymetrix Rat Gene 1.1 ST Array	10884274	-	-
Rat Genome 230 2.0 Array	1379281_PM_at	-	-
Rat Genome 230 2.0 Array	1379281_at	-	-
Affymetrix HT Rat Focus Array	1379281_PM_at	-	-
Affymetrix HT Rat Focus Array	1379281_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600004464.rn.1	TC0600000628.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600004467.rn.1	TC0600000628.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600004463.rn.1	TC0600000628.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600004465.rn.1	TC0600000628.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600004461.rn.1	TC0600000628.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600004462.rn.1	TC0600000628.rn.1	RTA TC
Rat Expression Set 230	1379281_at	-	-
Rat Expression Set 230	1379281_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10884274	-	-
Rat Genome U34 Set	rc_AA892798_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21454840	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352748	-	-
RatRef-12 Expression BeadChip	ILMN_63695	-	-