Rn00679107_g1

• Gene Symbol: Apoa5
• Gene Name: apolipoprotein A-V
• Gene Aliases: apo-AV, apoA-V
• Chromosome Location: Chr.8: 50559079 - 50561717 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apoa5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001277264.1	NP_001264193.1	1 - 2	67		69
	NM_080576.2	NP_542143.1	2 - 3	107		69
	XM_006242865.2	XP_006242927.1	2 - 3	205		69
GenBank mRNA	AF202887.1	-	1 - 2	52		69
	AF202888.1	-	1 - 2	52		69
	BC089780.1	-	2 - 3	107	7371817	69
	FQ210962.1	-	1 - 2	67		69
	FQ219463.1	-	1 - 2	67		69

More Information

Additional Information:

This assay is in the 5'UTR region of the AF202887.1, AF202888.1, BC089780.1, NM_001277264.1, NM_080576.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoa5

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

triglyceride metabolic process
cholesterol biosynthetic process
lipid transport
response to hormone
positive regulation of cholesterol esterification
positive regulation of triglyceride catabolic process
positive regulation of very-low-density lipoprotein particle remodeling
triglyceride catabolic process
regulation of intestinal cholesterol absorption
organ regeneration
neuron projection regeneration
cholesterol efflux
phospholipid efflux
triglyceride-rich lipoprotein particle remodeling
very-low-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
lipoprotein metabolic process
tissue regeneration
cholesterol homeostasis
reverse cholesterol transport
positive regulation of fatty acid biosynthetic process
phosphatidylcholine metabolic process
positive regulation of lipid catabolic process
positive regulation of lipoprotein lipase activity
acylglycerol homeostasis
triglyceride homeostasis

Function(s)

molecular_function
phospholipid binding
enzyme activator activity
heparin binding
lipid binding
cholesterol binding
cholesterol transporter activity
enzyme binding
phosphatidylcholine binding
lipase binding
low-density lipoprotein particle receptor binding
phosphatidylcholine-sterol O-acyltransferase activator activity
lipase activator activity
lipoprotein lipase activator activity
lipoprotein particle receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800004040.rn.1	TC0800000623.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800004042.rn.1	TC0800000623.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800004043.rn.1	TC0800000623.rn.1	RTA TC