Rn00681502_g1

• Gene Symbol: Shox2
• Gene Name: short stature homeobox 2
• Gene Aliases: -
• Chromosome Location: Chr.2: 164118175 - 164126783 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shox2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013028.1	NP_037160.1	3 - 4	350		107
GenBank mRNA	AJ002258.1	-	3 - 4	371		107
	AJ002259.1	-	3 - 4	350		107
	AJ002260.1	-	2 - 3	323		107

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200003829.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shox2

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast differentiation
positive regulation of mesenchymal cell proliferation
chondrocyte differentiation
chondrocyte development
heart valve development
cardiac atrium morphogenesis
regulation of transcription, DNA-templated
multicellular organism development
embryonic limb morphogenesis
regulation of chondrocyte differentiation
embryonic forelimb morphogenesis
positive regulation of smoothened signaling pathway
positive regulation of transcription from RNA polymerase II promoter
embryonic digestive tract morphogenesis
embryonic morphogenesis
positive regulation of skeletal muscle fiber development
positive regulation of axonogenesis
embryonic skeletal joint morphogenesis
cartilage development involved in endochondral bone morphogenesis
muscle tissue morphogenesis
regulation of branching morphogenesis of a nerve

Function(s)

sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200025673.rn.1	TC0200003829.rn.1	RTA TC