Rn00710435_m1 Best Coverage

• Gene Symbol: Syngap1
• Gene Name: synaptic Ras GTPase activating protein 1
• Gene Aliases: Syngap
• Chromosome Location: Chr.20: 5535434 - 5564657 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Syngap1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113409.2	NP_001106880.2	11 - 12	2299		68
	NM_181092.4	NP_851606.3	13 - 14	2362		68
GenBank mRNA	AF048976.1	-	13 - 14	2370		68
	AF058789.2	-	13 - 14	2249		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000224.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Syngap1

Panther Classification:

Molecular Function -

GTPase-activating protein

Gene Ontology Categories:

Process(es)

signal transduction
Ras protein signal transduction
pattern specification process
visual learning
dendrite development
receptor clustering
regulation of MAPK cascade
negative regulation of neuron apoptotic process
positive regulation of GTPase activity
negative regulation of Ras protein signal transduction
regulation of synaptic plasticity
regulation of long-term neuronal synaptic plasticity
negative regulation of axonogenesis
regulation of synapse structure or activity

Function(s)

GTPase activator activity
protein binding
SH3 domain binding
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000002175.rn.1	TC2000000224.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000002176.rn.1	TC2000000224.rn.1	RTA TC