Rn01400117_g1 Best Coverage

• Gene Symbol: Ccl20
• Gene Name: chemokine (C-C motif) ligand 20
• Gene Aliases: ST38, Scya20
• Chromosome Location: Chr.9: 88918357 - 88921011 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccl20
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019233.1	NP_062106.1	2 - 3	246		65
	XM_006245164.2	XP_006245226.1	2 - 3	312		65
GenBank mRNA	AF053312.1	-	2 - 3	247		65
	U90447.1	-	2 - 3	246		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900001001.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccl20

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

chemotaxis
inflammatory response
immune response
wound healing
positive regulation of interleukin-1 alpha biosynthetic process
positive regulation of nitric-oxide synthase biosynthetic process
cell chemotaxis
cellular response to lipopolysaccharide
cellular response to lipoteichoic acid
cellular response to organic substance
positive regulation of T cell migration

Function(s)

cytokine activity
chemokine activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0900008459.rn.1	TC0900001001.rn.1	RTA TC