Rn01402331_m1 Best Coverage

• Gene Symbol: Polr2d
• Gene Name: polymerase (RNA) II (DNA directed) polypeptide D
• Gene Aliases: -
• Chromosome Location: Chr.18: 24570762 - 24577894 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Polr2d
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108886.1	NP_001102356.1	1 - 2	131		77
GenBank mRNA	FQ228021.1	-	1 - 2	102		77
	FQ233353.1	-	1 - 2	98		77

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800000217.rn.1

• Set Membership: Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

DNA-directed RNA polymerase

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
transcription from RNA polymerase II promoter
transcription initiation from RNA polymerase II promoter
biological_process
mRNA export from nucleus in response to heat stress
recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
positive regulation of translational initiation

Function(s)

nucleotide binding
molecular_function
single-stranded DNA binding
single-stranded RNA binding
DNA-directed RNA polymerase activity
translation initiation factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1800001457.rn.1	TC1800000217.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800001458.rn.1	TC1800000217.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800001459.rn.1	TC1800000217.rn.1	RTA TC