Rn01409514_m1 Best Coverage

• Gene Symbol: Ptcd1
• Gene Name: pentatricopeptide repeat domain 1
• Gene Aliases: -
• Chromosome Location: Chr.12: 11215795 - 11233633 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptcd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109665.1	NP_001103135.1	6 - 7	1709		71
	XM_006248871.1	XP_006248933.1	7 - 8	1840		71
	XM_006248873.1	XP_006248935.1	6 - 7	1699		71
GenBank mRNA	BC129116.1	-	7 - 8	1749	7113830	71

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000189.rn.1

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

tRNA 3'-end processing

Function(s)

tRNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200001301.rn.1	TC1200000189.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200001300.rn.1	TC1200000189.rn.1	RTA TC