Rn01416009_m1 Best Coverage

• Gene Symbol: Polr3k
• Gene Name: polymerase (RNA) III (DNA directed) polypeptide K
• Gene Aliases: -
• Chromosome Location: Chr.3: 177374812 - 177379009 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Polr3k
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001014259.1	NP_001014281.1	2 - 3	266		59
GenBank mRNA	BC089990.1	-	2 - 3	266	7319381	59
	FQ212572.1	-	2 - 3	288		59
	FQ213710.1	-	2 - 3	289		59
	FQ213830.1	-	2 - 3	300		59
	FQ216547.1	-	2 - 3	289		59
	FQ226947.1	-	2 - 3	271		59
	FQ232144.1	-	2 - 3	300		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002614.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Polr3k

Panther Classification:

Molecular Function -

DNA-directed RNA polymerase, RNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

termination of RNA polymerase III transcription
biological_process

Function(s)

RNA polymerase III activity
molecular_function
DNA binding
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P307964	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240605	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	539359	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	760901	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P307964	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P307964	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P307964	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P307964	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10843133	-	-
Affymetrix Rat Gene 1.0 ST Array	10843135	-	-
Affymetrix Rat Gene 1.0 ST Array	10843134	-	-
Affymetrix Rat Gene 1.1 ST Array	10843132	-	-
Rat Genome 230 2.0 Array	1398875_PM_at	-	-
Rat Genome 230 2.0 Array	1398875_at	-	-
Affymetrix HT Rat Focus Array	1398875_PM_at	-	-
Affymetrix HT Rat Focus Array	1398875_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300019419.rn.1	TC0300002614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019420.rn.1	TC0300002614.rn.1	RTA TC
Rat Expression Set 230	1398875_PM_at	-	-
Rat Expression Set 230	1398875_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10843132	-	-
Rat Genome U34 Set	rc_AI105044_at	-	-
Rat Genome U34 Set	rc_AI228582_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21621133	-	-