Rn01427968_m1

• Gene Symbol: U2af1
• Gene Name: U2 small nuclear RNA auxiliary factor 1
• Gene Aliases: -
• Chromosome Location: Chr.20: 10396652 - 10407557 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: U2af1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001044291.1	NP_001037756.1	7 - 8	625		92
	XM_006256228.2	XP_006256290.1	7 - 8	642		92
GenBank mRNA	BC105905.1	-	7 - 8	625	7374686	92
	FQ229339.1	-	7 - 8	619		92

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001264.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Function(s)

nucleotide binding
poly(A) RNA binding
metal ion binding
RS domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P138001	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P138001	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P138001	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P138001	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940497	-	-
Affymetrix Rat Gene 1.1 ST Array	10940497	-	-
Rat Genome 230 2.0 Array	1393431_at	-	-
Rat Genome 230 2.0 Array	1393431_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000010468.rn.1	TC2000001264.rn.1	RTA TC
Rat Expression Set 230	1393431_at	-	-
Rat Expression Set 230	1393431_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940497	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22258658	-	-