Rn01428303_m1 Best Coverage

• Gene Symbol: Pacsin1
• Gene Name: protein kinase C and casein kinase substrate in neurons 1
• Gene Aliases: -
• Chromosome Location: Chr.20: 7241248 - 7286702 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pacsin1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017294.1	NP_058990.1	3 - 4	364		146
GenBank mRNA	AF104402.1	-	3 - 4	364		146

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000296.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pacsin1

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

cytoskeleton organization
actin filament organization
regulation of endocytosis
negative regulation of endocytosis
synaptic vesicle endocytosis
neuron development
neuron projection morphogenesis
protein localization to membrane
establishment of protein localization to plasma membrane
membrane tubulation
positive regulation of dendrite development

Function(s)

protein binding
phospholipid binding
cytoskeletal protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P163474	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P264477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	969328	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	741817	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	864966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	638522	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	50884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	492404	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	630708	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	939953	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	84249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	813100	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	233004	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	699346	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	818776	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	493518	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	496077	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	657981	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	176030	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877003	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	394535	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	563908	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	260382	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	954331	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	670632	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	241713	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	966349	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	696003	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	655243	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	699457	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	687070	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	275680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	837032	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	962592	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1009	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	71873	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	165565	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	164256	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	176048	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	72682	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P264477	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P163474	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P264477	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P163474	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P264477	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P163474	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P264477	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	48904	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	46962	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58441	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10828591	-	-
Affymetrix Rat Gene 1.0 ST Array	10828587	-	-
Affymetrix Rat Gene 1.0 ST Array	10828590	-	-
Affymetrix Rat Gene 1.0 ST Array	10828583	-	-
Affymetrix Rat Gene 1.0 ST Array	10828586	-	-
Affymetrix Rat Gene 1.0 ST Array	10828582	-	-
Affymetrix Rat Gene 1.0 ST Array	10828588	-	-
Affymetrix Rat Gene 1.0 ST Array	10828585	-	-
Affymetrix Rat Gene 1.0 ST Array	10828584	-	-
Affymetrix Rat Gene 1.0 ST Array	10828592	-	-
Affymetrix Rat Gene 1.0 ST Array	10828589	-	-
Affymetrix Rat Gene 1.1 ST Array	10828581	-	-
Rat Genome 230 2.0 Array	1368958_at	-	-
Rat Genome 230 2.0 Array	1368958_PM_at	-	-
Rat Genome 230 2.0 Array	1368959_PM_at	-	-
Rat Genome 230 2.0 Array	1368959_at	-	-
Affymetrix HT Rat Focus Array	1368959_at	-	-
Affymetrix HT Rat Focus Array	1368958_PM_at	-	-
Affymetrix HT Rat Focus Array	1368958_at	-	-
Affymetrix HT Rat Focus Array	1368959_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000002706.rn.1	TC2000000296.rn.1	RTA TC
Rat Expression Set 230	1368958_PM_at	-	-
Rat Expression Set 230	1368958_at	-	-
Rat Expression Set 230	1368959_PM_at	-	-
Rat Expression Set 230	1368959_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10828581	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20859397	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359407	-	-
RatRef-12 Expression BeadChip	ILMN_52259	-	-