Rn01428711_m1 Best Coverage

• Gene Symbol: Ube2d1
• Gene Name: ubiquitin-conjugating enzyme E2D 1
• Gene Aliases: -
• Chromosome Location: Chr.20: 18547370 - 18580291 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ube2d1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108530.1	NP_001102000.1	5 - 6	396		92

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000507.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
ubiquitin-dependent protein catabolic process
positive regulation of protein ubiquitination
protein K48-linked ubiquitination

Function(s)

ubiquitin-protein transferase activity
ATP binding
ligase activity
ubiquitin conjugating enzyme activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P000480	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	913205	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	535421	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	882925	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861221	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	494205	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829063	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	595804	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	452620	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	333146	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888376	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501694	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	368074	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164836	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	364010	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	4222	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	454151	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	774989	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	624010	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	25982	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	146474	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	14439	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	26134	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	72114	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	69650	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P000480	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P000480	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P000480	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P274550	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	31188	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19967	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10829699	-	-
Affymetrix Rat Gene 1.0 ST Array	10829698	-	-
Affymetrix Rat Gene 1.0 ST Array	10829697	-	-
Affymetrix Rat Gene 1.0 ST Array	10829700	-	-
Affymetrix Rat Gene 1.0 ST Array	10829702	-	-
Affymetrix Rat Gene 1.0 ST Array	10829701	-	-
Affymetrix Rat Gene 1.1 ST Array	10829694	-	-
Rat Genome 230 2.0 Array	1390259_at	-	-
Rat Genome 230 2.0 Array	1385548_PM_at	-	-
Rat Genome 230 2.0 Array	1390259_PM_at	-	-
Rat Genome 230 2.0 Array	1385548_at	-	-
Affymetrix HT Rat Focus Array	1390259_at	-	-
Affymetrix HT Rat Focus Array	1385548_PM_at	-	-
Affymetrix HT Rat Focus Array	1390259_PM_at	-	-
Affymetrix HT Rat Focus Array	1385548_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000004769.rn.1	TC2000000507.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000004771.rn.1	TC2000000507.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000004767.rn.1	TC2000000507.rn.1	RTA TC
Rat Expression Set 230	1385548_at	-	-
Rat Expression Set 230	1390259_PM_at	-	-
Rat Expression Set 230	1390259_at	-	-
Rat Expression Set 230	1385548_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10829694	-	-
Rat Genome U34 Set	AA942808_at	-	-
Rat Genome U34 Set	rc_AI231279_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22196065	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351247	-	-