Rn01429351_m1

• Gene Symbol: RT1-Db1
• Gene Name: RT1 class II, locus Db1
• Gene Aliases: Db1, RT1-Db, RT1-Db1n
• Chromosome Location: Chr.20: 4087621 - 4097190 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RT1-Db1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001008884.2	NP_001008884.1	3 - 4	709		162
GenBank mRNA	AF084933.1	-	3 - 4	649		162
	AY626207.1	-	3 - 4	645		162
	BC087691.1	-	4 - 5	629	7310949	162
	FQ225193.1	-	3 - 4	697		162
	FQ226724.1	-	3 - 4	697		162
	FQ226850.1	-	3 - 4	697		162
	FQ227087.1	-	3 - 4	694		162
	FQ228005.1	-	3 - 4	697		162
	FQ228129.1	-	3 - 4	697		162
	FQ228185.1	-	3 - 4	715		162
	FQ230360.1	-	3 - 4	697		162
	FQ231387.1	-	3 - 4	697		162
	FQ231709.1	-	3 - 4	697		162
	FQ232046.1	-	3 - 4	697		162
	FQ232100.1	-	3 - 4	696		162
	FQ233049.1	-	3 - 4	693		162
	FQ233335.1	-	3 - 4	697		162
	FQ234464.1	-	3 - 4	696		162
	KC222950.1	-	3 - 4	645		162

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000137.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene RT1-Db1

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Process(es)

immunoglobulin production involved in immunoglobulin mediated immune response
inflammatory response to antigenic stimulus
humoral immune response mediated by circulating immunoglobulin
peptide antigen assembly with MHC class II protein complex
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
polysaccharide assembly with MHC class II protein complex
negative regulation of inflammatory response to antigenic stimulus
immune response
biological_process
detection of bacterium
antigen processing and presentation of exogenous peptide antigen via MHC class II
regulation of interleukin-4 production
negative regulation of interferon-gamma production
response to interferon-gamma
positive regulation of insulin secretion involved in cellular response to glucose stimulus
T-helper 1 type immune response
negative regulation of T cell proliferation
protein tetramerization
regulation of interleukin-10 secretion

Function(s)

molecular_function
MHC class II protein complex binding
peptide antigen binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000001148.rn.1	TC2000000137.rn.1	RTA TC