Rn01435489_m1

• Gene Symbol: Cacfd1
• Gene Name: calcium channel flower domain containing 1
• Gene Aliases: RGD1311501
• Chromosome Location: Chr.3: 5555807 - 5571204 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cacfd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106561.1	NP_001100031.1	4 - 5	1199		75
	XM_006233756.2	XP_006233818.1	2 - 3	241		75

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300000131.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

synaptic vesicle endocytosis
calcium ion transmembrane transport

Function(s)

calcium channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P624493	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P114903	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	790472	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	883845	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	487821	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	65622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	232944	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	176750	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	440021	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	86880	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	34341	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P624493	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P114903	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P624493	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P114903	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P624493	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P114903	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P461794	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	38194	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10834666	-	-
Affymetrix Rat Gene 1.0 ST Array	10834661	-	-
Affymetrix Rat Gene 1.0 ST Array	10834667	-	-
Affymetrix Rat Gene 1.0 ST Array	10834659	-	-
Affymetrix Rat Gene 1.0 ST Array	10834665	-	-
Affymetrix Rat Gene 1.0 ST Array	10834664	-	-
Affymetrix Rat Gene 1.0 ST Array	10834663	-	-
Affymetrix Rat Gene 1.0 ST Array	10834660	-	-
Affymetrix Rat Gene 1.1 ST Array	10834632	-	-
Affymetrix Rat Gene 1.1 ST Array	10834662	-	-
Rat Genome 230 2.0 Array	1375325_at	-	-
Rat Genome 230 2.0 Array	1375325_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300001263.rn.1	TC0300000131.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300001262.rn.1	TC0300000131.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300001265.rn.1	TC0300000131.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300001261.rn.1	TC0300000131.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10834632	-	-
Affymetrix Rat Gene 1.0 ST Array	10834662	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21542338	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372487	-	-