Rn01436034_m1 Best Coverage

• Gene Symbol: Grin1
• Gene Name: glutamate receptor, ionotropic, N-methyl D-aspartate 1
• Gene Aliases: GluN1, NMDAR1, NR1
• Chromosome Location: Chr.3: 2507745 - 2534669 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Grin1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270602.1	NP_001257531.1	9 - 10	1584		73
	NM_001270603.1	NP_001257532.1	9 - 10	1584		73
	NM_001270605.1	NP_001257534.1	8 - 9	1521		73
	NM_001270606.1	NP_001257535.1	9 - 10	1584		73
	NM_001270608.1	NP_001257537.1	9 - 10	1584		73
	NM_001270610.1	NP_001257539.1	8 - 9	1521		73
	NM_001287423.1	NP_001274352.1	8 - 9	1521		73
	NM_017010.2	NP_058706.1	8 - 9	1521		73
	XM_006233555.2	XP_006233617.1	9 - 10	1590		73
	XM_006233556.2	XP_006233618.1	8 - 9	1527		73
GenBank mRNA	U08261.1	-	8 - 9	1432		73
	U08262.1	-	8 - 9	1432		73
	U08263.1	-	9 - 10	1471		73
	U08264.1	-	9 - 10	1471		73
	U08265.1	-	8 - 9	1432		73
	U08266.1	-	9 - 10	1471		73
	U08267.1	-	8 - 9	1432		73
	U08268.1	-	9 - 10	1471		73
	U11418.1	-	8 - 9	1337		73
	X63255.1	-	8 - 9	1462		73
	X65227.1	-	9 - 10	1260		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002669.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Grin1

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

conditioned taste aversion
startle response
suckling behavior
response to amphetamine
cation transport
calcium ion transport
cellular calcium ion homeostasis
respiratory gaseous exchange
learning or memory
learning
memory
long-term memory
associative learning
adult locomotory behavior
olfactory learning
visual learning
regulation of cell communication
positive regulation of cell death
response to organic cyclic compound
response to amine
propylene metabolic process
sensory perception of pain
pons maturation
cerebral cortex development
ion transmembrane transport
regulation of ion transmembrane transport
social behavior
ionotropic glutamate receptor signaling pathway
synaptic transmission, glutamatergic
regulation of membrane potential
positive regulation of apoptotic process
response to morphine
regulation of neuron apoptotic process
negative regulation of neuron apoptotic process
regulation of respiratory gaseous exchange
response to ethanol
positive regulation of transcription from RNA polymerase II promoter
regulation of synaptic plasticity
regulation of neuronal synaptic plasticity
regulation of long-term neuronal synaptic plasticity
rhythmic process
regulation of dendrite morphogenesis
regulation of axonogenesis
neuromuscular process
protein tetramerization
response to calcium ion
regulation of synapse assembly
calcium ion homeostasis
excitatory postsynaptic potential
prepulse inhibition
male mating behavior
response to fungicide
calcium ion transmembrane transport
cellular response to manganese ion
positive regulation of excitatory postsynaptic potential

Function(s)

ionotropic glutamate receptor activity
NMDA glutamate receptor activity
receptor binding
extracellular-glutamate-gated ion channel activity
cation channel activity
calcium channel activity
calcium ion binding
protein binding
calmodulin binding
glycine binding
glutamate binding
enzyme binding
voltage-gated cation channel activity
glutamate receptor binding
neurotransmitter binding
protein heterodimerization activity
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300019860.rn.1	TC0300002669.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019857.rn.1	TC0300002669.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019858.rn.1	TC0300002669.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019861.rn.1	TC0300002669.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019859.rn.1	TC0300002669.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300019856.rn.1	TC0300002669.rn.1	RTA TC