Rn01438160_m1 Best Coverage

• Gene Symbol: Satb2
• Gene Name: SATB homeobox 2
• Gene Aliases: RGD1562369
• Chromosome Location: Chr.9: 63456877 - 63641408 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Satb2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109306.1	NP_001102776.1	3 - 4	627		67
	XM_006244931.2	XP_006244993.1	3 - 4	1299		67
	XM_008767128.1	XP_008765350.1	2 - 3	1071		67
	XM_008767129.1	XP_008765351.1	3 - 4	573		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900002005.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

helix-turn-helix transcription factor, DNA-binding transcription factor, Lambda repressor-like transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
neuron migration
osteoblast development
chromatin remodeling
transcription, DNA-templated
embryonic pattern specification
regulation of gene expression
commitment of neuronal cell to specific neuron type in forebrain
positive regulation of transcription from RNA polymerase II promoter
embryonic skeletal system morphogenesis
cartilage development
palate development
cellular response to organic substance

Function(s)

DNA binding
chromatin binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0900016505.rn.1	TC0900002005.rn.1	RTA TC