Rn01441529_g1 Best Coverage

• Gene Symbol: Hspd1
• Gene Name: heat shock protein 1 (chaperonin)
• Gene Aliases: Hsp60, Hspd1-30p
• Chromosome Location: Chr.9: 61680529 - 61691202 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hspd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022229.2	NP_071565.2	2 - 3	230		100
	XM_006244932.2	XP_006244994.1	2 - 3	266		100
GenBank mRNA	BC086507.1	-	2 - 3	230	7103955	100
	X53585.1	-	1 - 2	94		100
	X54793.1	-	1 - 2	178		100

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hspd1

Gene Ontology Categories:

Process(es)

response to hypoxia
detection of misfolded protein
B cell cytokine production
MyD88-dependent toll-like receptor signaling pathway
positive regulation of T cell mediated immune response to tumor cell
'de novo' protein folding
activation of cysteine-type endopeptidase activity involved in apoptotic process
response to unfolded protein
response to heat
response to organic substance
response to organic cyclic compound
response to lipopolysaccharide
positive regulation of interferon-alpha production
positive regulation of interferon-gamma production
positive regulation of interleukin-10 production
positive regulation of interleukin-12 production
positive regulation of interleukin-6 production
response to ATP
protein refolding
B cell proliferation
T cell activation
B cell activation
response to cocaine
response to drug
response to hydrogen peroxide
positive regulation of macrophage activation
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of neuron apoptotic process
response to estrogen
isotype switching to IgG isotypes
positive regulation of inflammatory response
protein stabilization
positive regulation of T cell activation
chaperone mediated protein folding requiring cofactor

Function(s)

lipopolysaccharide binding
protease binding
p53 binding
double-stranded RNA binding
protein binding
ATP binding
ubiquitin protein ligase binding
protein complex binding
insulin binding
poly(A) RNA binding
protein heterodimerization activity
chaperone binding
misfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0900016423.rn.1	TC0900001994.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900016425.rn.1	TC0900001994.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900016426.rn.1	TC0900001994.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900016421.rn.1	TC0900001994.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900016422.rn.1	TC0900001994.rn.1	RTA TC