Rn01442452_m1 Best Coverage

• Gene Symbol: Nub1
• Gene Name: negative regulator of ubiquitin-like proteins 1
• Gene Aliases: BS4, NYREN18
• Chromosome Location: Chr.4: 6950870 - 6981400 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nub1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013925.1	NP_001013947.1	9 - 10	1077		120
GenBank mRNA	BC083586.1	-	9 - 10	1077	7131376	120

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002170.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nub1

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
biological_process
protein ubiquitination
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
response to interferon-gamma
response to tumor necrosis factor

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P17057	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	774751	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	360949	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	761498	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	65684	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	287032	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	908608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	238522	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	955851	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1566	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	792507	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	555085	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	567564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	802557	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	410032	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55669	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	286572	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	524065	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	198731	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	922772	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	225014	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	474642	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	133456	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	172084	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	141705	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17057	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17057	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P17057	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P164287	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P462823	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P358894	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	14545	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	57438	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	23028	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10859970	-	-
Affymetrix Rat Gene 1.0 ST Array	10859982	-	-
Affymetrix Rat Gene 1.0 ST Array	10859977	-	-
Affymetrix Rat Gene 1.0 ST Array	10859979	-	-
Affymetrix Rat Gene 1.0 ST Array	10859984	-	-
Affymetrix Rat Gene 1.0 ST Array	10859972	-	-
Affymetrix Rat Gene 1.0 ST Array	10859983	-	-
Affymetrix Rat Gene 1.0 ST Array	10859985	-	-
Affymetrix Rat Gene 1.0 ST Array	10859973	-	-
Affymetrix Rat Gene 1.0 ST Array	10859981	-	-
Affymetrix Rat Gene 1.0 ST Array	10859975	-	-
Affymetrix Rat Gene 1.0 ST Array	10859971	-	-
Affymetrix Rat Gene 1.0 ST Array	10859976	-	-
Affymetrix Rat Gene 1.0 ST Array	10859974	-	-
Affymetrix Rat Gene 1.0 ST Array	10859980	-	-
Affymetrix Rat Gene 1.0 ST Array	10859978	-	-
Affymetrix Rat Gene 1.1 ST Array	10859969	-	-
Rat Genome 230 2.0 Array	1373775_PM_at	-	-
Rat Genome 230 2.0 Array	1373775_at	-	-
Affymetrix HT Rat Focus Array	1373775_at	-	-
Affymetrix HT Rat Focus Array	1373775_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400015425.rn.1	TC0400002170.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400015424.rn.1	TC0400002170.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400015423.rn.1	TC0400002170.rn.1	RTA TC
Rat Expression Set 230	1373775_at	-	-
Rat Expression Set 230	1373775_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10859969	-	-
Rat Genome U34 Set	rc_AA924532_at	-	-
Rat Genome U34 Set	rc_AI232313_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21569786	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372726	-	-