Rn01442522_m1 Best Coverage

• Gene Symbol: Kcnh2
• Gene Name: potassium channel, voltage gated eag related subfamily H, member 2
• Gene Aliases: ERG1
• Chromosome Location: Chr.4: 7355161 - 7387243 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Kcnh2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053949.1	NP_446401.1	14 - 15	3341		62
	XM_006235867.2	XP_006235929.1	14 - 15	3474		62
	XM_008762630.1	XP_008760852.1	10 - 11	2662		62
GenBank mRNA	AY669863.1	-	10 - 11	2315		62
	Z96106.1	-	14 - 15	3341		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400000114.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Kcnh2

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

phosphorelay signal transduction system
potassium ion transport
brain development
spinal cord development
signal transduction by protein phosphorylation
regulation of ion transmembrane transport
cellular response to drug
regulation of membrane potential
protein heterooligomerization
potassium ion homeostasis
cardiac muscle contraction
regulation of membrane repolarization
regulation of ventricular cardiac muscle cell membrane repolarization
potassium ion export
potassium ion transmembrane transport
ventricular cardiac muscle cell action potential
membrane depolarization during action potential
membrane repolarization during action potential
membrane repolarization during cardiac muscle cell action potential
regulation of heart rate by cardiac conduction
regulation of potassium ion transmembrane transport
negative regulation of potassium ion transmembrane transport
positive regulation of potassium ion transmembrane transport
negative regulation of potassium ion export

Function(s)

phosphorelay sensor kinase activity
ion channel activity
inward rectifier potassium channel activity
voltage-gated potassium channel activity
delayed rectifier potassium channel activity
potassium channel activity
protein binding
ubiquitin protein ligase binding
identical protein binding
protein homodimerization activity
scaffold protein binding
voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P066081	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12992	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	106016	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	133954	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	345931	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	632697	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	227646	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	653789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	445242	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457504	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	48996	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	329106	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	2106	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151255	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	533519	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	5315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	218565	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	654384	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	817939	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	398805	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	571699	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	514145	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	846508	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	268656	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	176179	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	344722	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	584526	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	307405	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	66540	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	143884	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	22213	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	103140	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	34218	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P066081	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12992	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12992	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P066081	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P066081	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12992	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12992	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702124116	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34249	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	27178	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	39116	-	-
Agilent Rat cDNA Microarray (G4105A)	702124116	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10852944	-	-
Affymetrix Rat Gene 1.0 ST Array	10852948	-	-
Affymetrix Rat Gene 1.0 ST Array	10852946	-	-
Affymetrix Rat Gene 1.0 ST Array	10852947	-	-
Affymetrix Rat Gene 1.0 ST Array	10852951	-	-
Affymetrix Rat Gene 1.0 ST Array	10852935	-	-
Affymetrix Rat Gene 1.0 ST Array	10852936	-	-
Affymetrix Rat Gene 1.0 ST Array	10852941	-	-
Affymetrix Rat Gene 1.0 ST Array	10852939	-	-
Affymetrix Rat Gene 1.0 ST Array	10852937	-	-
Affymetrix Rat Gene 1.0 ST Array	10852949	-	-
Affymetrix Rat Gene 1.0 ST Array	10852940	-	-
Affymetrix Rat Gene 1.0 ST Array	10852942	-	-
Affymetrix Rat Gene 1.0 ST Array	10852938	-	-
Affymetrix Rat Gene 1.0 ST Array	10852950	-	-
Affymetrix Rat Gene 1.0 ST Array	10852952	-	-
Affymetrix Rat Gene 1.0 ST Array	10852943	-	-
Affymetrix Rat Gene 1.1 ST Array	10852934	-	-
Rat Genome 230 2.0 Array	1368343_PM_at	-	-
Rat Genome 230 2.0 Array	1368343_at	-	-
Affymetrix HT Rat Focus Array	1368343_at	-	-
Affymetrix HT Rat Focus Array	1368343_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400000855.rn.1	TC0400000114.rn.1	RTA TC
Rat Expression Set 230	1368343_at	-	-
Rat Expression Set 230	1368343_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10852934	-	-
Rat Genome U34 Set	Z96106_at	-	-
Rat Genome U34 Set	U75210_s_at	-	-
Rat Genome U34 Set	U75210_s_at	-	-
Rat Genome U34 Set	Z96106_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21848019	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370853	-	-
RatRef-12 Expression BeadChip	ILMN_57973	-	-