Rn01451215_m1 Best Coverage

• Gene Symbol: Rorb
• Gene Name: RAR-related orphan receptor B
• Gene Aliases: -
• Chromosome Location: Chr.1: 234252757 - 234442597 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rorb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270958.1	NP_001257887.1	8 - 9	1742		93
	XM_002728869.3	XP_002728915.1	8 - 9	3394		93

More Information

• Set Membership: Amplicon length between 86 and 100, Nuclear Receptor, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
G-protein coupled receptor signaling pathway
brain development
visual perception
circadian rhythm
response to hormone
intracellular receptor signaling pathway
amacrine cell differentiation
eye photoreceptor cell development
regulation of circadian rhythm
steroid hormone mediated signaling pathway
negative regulation of osteoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
retinal rod cell development
retinal cone cell development
retina development in camera-type eye
cellular response to retinoic acid

Function(s)

transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
transcription factor binding
zinc ion binding
melatonin receptor activity
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P463791	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P463791	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P463791	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P463791	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P463791	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1371257_at	-	-
Rat Genome 230 2.0 Array	1371257_PM_at	-	-
Affymetrix HT Rat Focus Array	1371257_at	-	-
Affymetrix HT Rat Focus Array	1371257_PM_at	-	-
Rat Expression Set 230	1371257_PM_at	-	-
Rat Expression Set 230	1371257_at	-	-
Rat Genome U34 Set	L14610_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21671143	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359047	-	-
RatRef-12 Expression BeadChip	ILMN_65833	-	-