Rn01455972_m1 Best Coverage

• Gene Symbol: Cftr
• Gene Name: cystic fibrosis transmembrane conductance regulator
• Gene Aliases: RGD1561193
• Chromosome Location: Chr.4: 42693274 - 42860676 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cftr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031506.1	NP_113694.1	1 - 2	187		96
	XM_006236097.2	XP_006236159.1	2 - 3	306		96
	XM_008762680.1	XP_008760902.1	2 - 3	306		96
GenBank mRNA	FJ959076.1	-	1 - 2	50		96

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400000413.rn.1

• Set Membership: Amplicon length between 86 and 100, Ion Channel, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter

Gene Ontology Categories:

Process(es)

cholesterol biosynthetic process
chloride transport
water transport
body fluid secretion
bicarbonate transport
iodide transport
cholesterol transport
transepithelial chloride transport
lung development
cellular response to hormone stimulus
response to cytokine
vasodilation
response to drug
response to peptide hormone
response to estrogen
positive regulation of vasodilation
sperm capacitation
intracellular pH elevation
membrane hyperpolarization
cellular response to cAMP
chloride transmembrane transport
positive regulation of voltage-gated chloride channel activity

Function(s)

molecular_function
chloride channel activity
channel-conductance-controlling ATPase activity
ATP binding
bicarbonate transmembrane transporter activity
chloride transmembrane transporter activity
chloride channel inhibitor activity
enzyme binding
PDZ domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400002937.rn.1	TC0400000413.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400002941.rn.1	TC0400000413.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400002940.rn.1	TC0400000413.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400002938.rn.1	TC0400000413.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400002939.rn.1	TC0400000413.rn.1	RTA TC