Rn01458334_m1 Best Coverage

• Gene Symbol: Psip1
• Gene Name: PC4 and SFRS1 interacting protein 1
• Gene Aliases: Ledgf, Psip2, SBP75
• Chromosome Location: Chr.5: 101556198 - 101588664 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psip1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_175765.2	NP_786941.1	6 - 7	648		103
	XM_006238353.2	XP_006238415.1	7 - 8	872		103
	XM_006238354.2	XP_006238416.1	7 - 8	871		103
	XM_008763779.1	XP_008762001.1	7 - 8	871		103
GenBank mRNA	AB285525.1	-		551		103
	AF339084.1	-	6 - 7	648		103
	AF372090.1	-	6 - 7	648		103
	BC093606.1	-	7 - 8	806	7317952	103

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003045.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psip1

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

mRNA 5'-splice site recognition
transcription, DNA-templated
regulation of transcription, DNA-templated
response to oxidative stress
response to heat
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II transcription coactivator activity
chromatin binding
activating transcription factor binding
poly(A) RNA binding
supercoiled DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500022483.rn.1	TC0500003045.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500022484.rn.1	TC0500003045.rn.1	RTA TC