Rn01461639_g1 Best Coverage

• Gene Symbol: Pgap3
• Gene Name: post-GPI attachment to proteins 3
• Gene Aliases: Perld1
• Chromosome Location: Chr.10: 86343058 - 86355491 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pgap3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001143895.1	NP_001137367.1	7 - 8	935		97
	XM_008768113.1	XP_008766335.1	6 - 7	1359		97
GenBank mRNA	BC161914.1	-	7 - 8	902	8369613	97

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003710.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

GPI anchor metabolic process

Function(s)

hydrolase activity, acting on ester bonds

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P761492	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P761492	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P761492	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P761492	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1374343_at	-	-
Rat Genome 230 2.0 Array	1374343_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000033194.rn.1	TC1000003710.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000033195.rn.1	TC1000003710.rn.1	RTA TC
Rat Expression Set 230	1374343_at	-	-
Rat Expression Set 230	1374343_PM_at	-	-
Rat Genome U34 Set	rc_AI059469_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21466332	-	-