Rn01462937_m1 Best Coverage

• Gene Symbol: Ybx3
• Gene Name: Y box binding protein 3
• Gene Aliases: Csda, Dbpa, Yb2
• Chromosome Location: Chr.4: 165606819 - 165630041 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ybx3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031979.3	NP_114185.3	3 - 4	517		82
GenBank mRNA	D28557.1	-	3 - 4	381		82
	U22893.1	-	3 - 4	520		82

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003891.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ybx3

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
male gonad development
fertilization
organ regeneration
negative regulation of apoptotic process
positive regulation of organ growth
negative regulation of skeletal muscle tissue development
negative regulation of necroptotic process
cellular response to tumor necrosis factor
cellular hyperosmotic response
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
single-stranded DNA binding
mRNA 3'-UTR binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400027818.rn.1	TC0400003891.rn.1	RTA TC