Rn01463219_g1

Gene Symbol:

LOC103690024 Pex5

Gene Name:

peroxisomal targeting signal 1 receptor-like

peroxisomal biogenesis factor 5

Gene Aliases:

-

PTS1-BP, PTS1R

Chromosome Location:

Chr.4: 156403016 - 156428232 on Build Rnor_6.0

Chromosome Location:

Chr.4: 156983914 - 157009675 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC103690024
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008763277.1	XP_008761499.1		450		87

Gene Symbol: Pex5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001170584.1	NP_001164055.1	4 - 5	518		87
	XM_006237384.2	XP_006237446.1	4 - 5	519		87
	XM_006237385.2	XP_006237447.1	4 - 5	449		87
GenBank mRNA	CK477113.1	-	4 - 5	387		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003712.rn.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

very long-chain fatty acid metabolic process
neuron migration
protein targeting to peroxisome
fatty acid beta-oxidation
mitochondrion organization
mitochondrial membrane organization
endoplasmic reticulum organization
peroxisome organization
biological_process
isoprenoid biosynthetic process
protein import into peroxisome matrix
protein import into peroxisome matrix, docking
protein import into peroxisome matrix, translocation
cerebral cortex cell migration
cerebral cortex neuron differentiation
positive regulation of multicellular organism growth
cellular lipid metabolic process
protein import into peroxisome membrane
cell development
neuromuscular process
protein tetramerization
negative regulation of protein homotetramerization

Function(s)

peroxisome targeting sequence binding
molecular_function
peroxisome matrix targeting signal-1 binding
protein C-terminus binding
enzyme binding
small GTPase binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400026204.rn.1	TC0400003712.rn.1	RTA TC