Rn01464085_m1 Best Coverage

• Gene Symbol: Ndel1
• Gene Name: nudE neurodevelopment protein 1-like 1
• Gene Aliases: NUDE2, Nudel
• Chromosome Location: Chr.10: 55411888 - 55456654 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ndel1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133320.1	NP_579854.1	5 - 6	575		71
	XM_006246571.2	XP_006246633.1	5 - 6	984		71
	XM_006246572.2	XP_006246634.1	5 - 6	977		71
	XM_006246573.2	XP_006246635.1	5 - 6	725		71
	XM_006246574.2	XP_006246636.1	5 - 6	610		71
	XM_006246575.2	XP_006246637.1	5 - 6	1088		71
	XM_006246576.2	XP_006246638.1	5 - 6	978		71
	XM_006246578.2	XP_006246640.1	5 - 6	724		71
GenBank mRNA	AY008298.1	-	5 - 6	575		71
	BC070909.1	-	5 - 6	665	7103650	71

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003050.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ndel1

Gene Ontology Categories:

Process(es)

establishment of mitotic spindle orientation
microtubule cytoskeleton organization
neuron migration
inner cell mass cell proliferation
proteolysis
microtubule nucleation
chromosome segregation
mitotic centrosome separation
retrograde axonal transport
regulation of neuron projection development
cell migration
cerebral cortex radially oriented cell migration
central nervous system neuron axonogenesis
neuron projection development
positive regulation of axon extension
vesicle transport along microtubule
positive regulation of axon regeneration
nuclear envelope disassembly
establishment of chromosome localization
centrosome localization
neurofilament cytoskeleton organization
canonical Wnt signaling pathway
neuron projection extension

Function(s)

protein binding
microtubule binding
protein complex binding
alpha-tubulin binding
beta-tubulin binding
oligopeptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000026884.rn.1	TC1000003050.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000026883.rn.1	TC1000003050.rn.1	RTA TC