Rn01469776_m1 Best Coverage

• Gene Symbol: Sdc1
• Gene Name: syndecan 1
• Gene Aliases: HSPG, SYNDECA, Synd1, Syndecan
• Chromosome Location: Chr.6: 33885576 - 33908038 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sdc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013026.2	NP_037158.1	2 - 3	359		131
GenBank mRNA	BC061834.1	-	2 - 3	359	5600086	131
	M81785.1	-	2 - 3	374		131
	S61865.1	-	2 - 3	374		131

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600000399.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sdc1

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

ureteric bud development
inflammatory response
cell adhesion
cell-cell signaling
response to toxic substance
response to organic substance
wound healing
odontogenesis
response to hydrogen peroxide
myoblast development
response to glucocorticoid
response to cAMP
response to calcium ion
striated muscle cell development
Sertoli cell development
canonical Wnt signaling pathway
positive regulation of exosomal secretion
positive regulation of extracellular exosome assembly

Function(s)

glycoprotein binding
protein binding
protein C-terminus binding
extracellular matrix binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0600002713.rn.1	TC0600000399.rn.1	RTA TC