Rn01477185_m1 Best Coverage

• Gene Symbol: Setd4
• Gene Name: SET domain containing 4
• Gene Aliases: Rda279
• Chromosome Location: Chr.11: 33781869 - 33803115 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Setd4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113747.1	NP_001107219.1		1020		67
	XM_006248028.2	XP_006248090.1		5318		67
	XM_008768559.1	XP_008766781.1		7536		67
	XM_008768560.1	XP_008766782.1		4314		67
	XM_008768561.1	XP_008766783.1		4047		67
GenBank mRNA	AF388528.1	-	1 - 2	393		67
	BC079469.1	-		856		67
	BC158669.1	-		1020	8370827	67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100001344.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

methyltransferase

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1039678	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	500753	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	587825	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	212596	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	180441	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829260	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	920871	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	20322	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	606775	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	498238	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	804098	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	395675	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	847180	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	74482	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	133906	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1039678	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1039678	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1039678	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1039678	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10054	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94955	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10753235	-	-
Affymetrix Rat Gene 1.0 ST Array	10753240	-	-
Affymetrix Rat Gene 1.0 ST Array	10753239	-	-
Affymetrix Rat Gene 1.0 ST Array	10753232	-	-
Affymetrix Rat Gene 1.0 ST Array	10753242	-	-
Affymetrix Rat Gene 1.0 ST Array	10753233	-	-
Affymetrix Rat Gene 1.0 ST Array	10753234	-	-
Affymetrix Rat Gene 1.0 ST Array	10753238	-	-
Affymetrix Rat Gene 1.0 ST Array	10753236	-	-
Affymetrix Rat Gene 1.0 ST Array	10753243	-	-
Affymetrix Rat Gene 1.0 ST Array	10753241	-	-
Affymetrix Rat Gene 1.1 ST Array	10753231	-	-
Rat Genome 230 2.0 Array	1370947_at	-	-
Rat Genome 230 2.0 Array	1370947_PM_at	-	-
Affymetrix HT Rat Focus Array	1370947_at	-	-
Affymetrix HT Rat Focus Array	1370947_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1100008001.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008005.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007997.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008023.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008010.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007998.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008026.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008013.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008006.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008024.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008011.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008025.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008009.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008000.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100007995.rn.1	TC1100001344.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100008008.rn.1	TC1100001344.rn.1	RTA TC
Rat Expression Set 230	1370947_PM_at	-	-
Rat Expression Set 230	1370947_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10753231	-	-
Rat Genome U34 Set	rc_AI228197_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21563553	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358039	-	-