Rn01480215_m1 Best Coverage

• Gene Symbol: Sptbn4
• Gene Name: spectrin, beta, non-erythrocytic 4
• Gene Aliases: Spnb4
• Chromosome Location: Chr.1: 84168492 - 84254686 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sptbn4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100845.2	NP_001094315.2	20 - 21	4478		57
	XM_008759140.1	XP_008757362.1	20 - 21	4519		57
	XM_008759141.1	XP_008757363.1	20 - 21	4519		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005042.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

regulation of sodium ion transport
axonogenesis
sensory perception of sound
adult walking behavior
biological_process
fertilization
negative regulation of heart rate
transmission of nerve impulse
central nervous system projection neuron axonogenesis
reproductive process
adult behavior
regulation of peptidyl-serine phosphorylation
cellular protein localization
positive regulation of multicellular organism growth
clustering of voltage-gated sodium channels
cardiac conduction
establishment of protein localization to plasma membrane

Function(s)

molecular_function
actin binding
structural constituent of cytoskeleton
phospholipid binding
phosphatase binding
ankyrin binding
spectrin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P125676	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P125676	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P125676	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P125676	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P482710	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P20007	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10720061	-	-
Affymetrix Rat Gene 1.0 ST Array	10720060	-	-
Affymetrix Rat Gene 1.0 ST Array	10720064	-	-
Affymetrix Rat Gene 1.0 ST Array	10720062	-	-
Affymetrix Rat Gene 1.0 ST Array	10720059	-	-
Affymetrix Rat Gene 1.0 ST Array	10720057	-	-
Affymetrix Rat Gene 1.0 ST Array	10720058	-	-
Affymetrix Rat Gene 1.0 ST Array	10720063	-	-
Affymetrix Rat Gene 1.1 ST Array	10720056	-	-
Rat Genome 230 2.0 Array	1376564_at	-	-
Rat Genome 230 2.0 Array	1376564_PM_at	-	-
Affymetrix HT Rat Focus Array	1376564_PM_at	-	-
Affymetrix HT Rat Focus Array	1376564_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100040158.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040161.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040162.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040165.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040163.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040164.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040159.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040160.rn.1	TC0100005042.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100040166.rn.1	TC0100005042.rn.1	RTA TC
Rat Expression Set 230	1376564_at	-	-
Rat Expression Set 230	1376564_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10720056	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21913096	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354680	-	-
RatRef-12 Expression BeadChip	ILMN_66300	-	-