Rn01480407_m1 Best Coverage

• Gene Symbol: Rnf34
• Gene Name: ring finger protein 34, E3 ubiquitin protein ligase
• Gene Aliases: Momo
• Chromosome Location: Chr.12: 39164290 - 39185212 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rnf34
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001004075.1	NP_001004075.1	3 - 4	728		65
	XM_006249360.2	XP_006249422.1	3 - 4	1261		65
	XM_006249361.2	XP_006249423.1	4 - 5	938		65
	XM_008769214.1	XP_008767436.1	3 - 4	646		65
GenBank mRNA	AY157968.1	-	2 - 3	633		65
	BC079044.1	-	3 - 4	728	7115027	65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001582.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rnf34

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein ubiquitination
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
cellular response to cold
protein K48-linked ubiquitination
negative regulation of signal transduction by p53 class mediator
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
regulation of oxygen metabolic process
negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis

Function(s)

p53 binding
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
ubiquitin protein ligase binding
ubiquitin protein ligase activity
phosphatidylinositol phosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200013462.rn.1	TC1200001582.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013465.rn.1	TC1200001582.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013463.rn.1	TC1200001582.rn.1	RTA TC