Rn01482927_m1 Best Coverage

• Gene Symbol: Col4a1
• Gene Name: collagen, type IV, alpha 1
• Gene Aliases: -
• Chromosome Location: Chr.16: 83522162 - 83632153 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Col4a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001135009.1	NP_001128481.1	50 - 51	4957		69
GenBank mRNA	BC089096.1	-	4 - 5	538		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600001009.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Process(es)

patterning of blood vessels
brain development
neuromuscular junction development
epithelial cell differentiation
blood vessel morphogenesis
retinal blood vessel morphogenesis
renal tubule morphogenesis
cellular response to amino acid stimulus
basement membrane organization

Function(s)

molecular_function
extracellular matrix structural constituent
platelet-derived growth factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1600007677.rn.1	TC1600001009.rn.1	RTA TC